Publications
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Casadei CM, Hosseinizadeh A, Bliven S, Weinert T, Standfuss J, Fung R, et al.
Low-pass spectral analysis of time-resolved serial femtosecond crystallography data
Structural Dynamics. 2023; 10(3): 034101 (18 pp.). https://doi.org/10.1063/4.0000178
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Minotti C, Ashton A, Bliven S
Enhancing data management with SciCat: a comprehensive overview of a metadata catalogue for research infrastructures
In: 19th international conference on accelerator large experimental physics control system. Geneva: JACoW Publishing; 2023:1195-1200. https://doi.org/10.18429/JACoW-ICALEPCS2023-THMBCMO02
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Delucchi M, Näf P, Bliven S, Anisimova M
TRAL 2.0: tandem repeat detection with circular profile hidden markov models and evolutionary aligner
Frontiers in Bioinformatics. 2021; 1: 691865 (6 pp.). https://doi.org/10.3389/fbinf.2021.691865
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Bliven SE, Lafita A, Rose PW, Capitani G, Prlić A, Bourne PE
Analyzing the symmetrical arrangement of structural repeats in proteins with CE-Symm
PLoS Computational Biology. 2019; 15(4): e1006842 (18 pp.). https://doi.org/10.1371/journal.pcbi.1006842
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Bliven S, Lafita A, Parker A, Capitani G, Duarte JM
Automated evaluation of quaternary structures from protein crystals
PLoS Computational Biology. 2018; 14(4): e1006104 (19 pp.). https://doi.org/10.1371/journal.pcbi.1006104
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Lafita A, Bliven S, Kryshtafovych A, Bertoni M, Monastyrskyy B, Duarte JM, et al.
Assessment of protein assembly prediction in CASP12
Proteins. 2018; 86(S1): 247-256. https://doi.org/10.1002/prot.25408
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Liu T, Ish-Shalom S, Torng W, Lafita A, Bock C, Mort M, et al.
Biological and functional relevance of CASP predictions
Proteins. 2018; 86(1): 374-386. https://doi.org/10.1002/prot.25396
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Markovic-Mueller S, Stuttfeld E, Asthana M, Weinert T, Bliven S, Goldie KN, et al.
Structure of the full-length VEGFR-1 extracellular domain in complex with VEGF-A
Structure. 2017; 25(2): 341-352. https://doi.org/10.1016/j.str.2016.12.012
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Zhao Z, Liu Q, Bliven S, Xie L, Bourne PE
Determining cysteines available for covalent inhibition across the human kinome
Journal of Medicinal Chemistry. 2017; 60(7): 2879-2889. https://doi.org/10.1021/acs.jmedchem.6b01815
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Capitani G, Duarte JM, Baskaran K, Bliven S, Somody JC
Understanding the fabric of protein crystals: computational classification of biological interfaces and crystal contacts
Bioinformatics. 2016; 32(4): 481-489. https://doi.org/10.1093/bioinformatics/btv622
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Baskaran K, Duarte JM, Biyani N, Bliven S, Capitani G
A PDB-wide, evolution-based assessment of protein-protein interfaces
BMC Structural Biology. 2014; 14: 22 (11 pp.). https://doi.org/10.1186/s12900-014-0022-0
DORA PSI